undergraduates | Deep Sea News https://deepseanews.com All the news on the Earth's largest environment. Fri, 03 Mar 2017 18:16:14 +0000 en-US hourly 1 https://csrtech.com Support LUMCON ocean scholarships, and get rural, low-income kids hooked on marine science! https://deepseanews.com/2017/03/support-lumcon-ocean-scholarships-and-get-rural-low-income-kids-hooked-on-marine-science/ Fri, 03 Mar 2017 17:33:43 +0000 https://www.deepseanews.com/?p=57807 How do we solve the diversity problem in marine science? This a complicated question without a single answer – but there is no question that we…

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How do we solve the diversity problem in marine science?

This a complicated question without a single answer – but there is no question that we need to do everything we can to get all the young’uns hooked on science. It is especially important to make science accessible (and fun!) for underrepresented groups – African-Americans, Latinos, Native Americans, LBGTQ youth, first-generation college students…the list goes on. “Diversity” means a lot of things, and all of those definitions are important. I speak from personal experience here, as a first-generation college student coming from a literal blue collar family (my dad wears a blue jumpsuit with a name patch to work – and he is not wearing it in the ironic hipster way).

Today I write with a simple request: Help low income, rural students experience the joy of marine science, with a donation to the LUMCON scholarship fund.

Here at Deep Sea News we have a strong tradition of raising money (and awareness!) for worthy causes. For a time we ran annual campaigns to fund ocean education in K-12 classrooms through the Donors Choose program – Kevin Zelnio and our friends at Southern Fried Science helped us raise over $4800 in 2009 to support >1500 students in classrooms across the country.

Its high time we reach out again, and this time I personally want to highlight the amazing programs at LUMCON (The Louisiana Universities Marine Consortium, a marine station located at the tip of the boot in Louisiana). LUMCON is the wonderful institution where Dr. M. has just taken the reins as executive director, and they are doing a big push to establish a scholarship fund for field programs aimed at K-12 students and undergraduates (again, these are rural, low-income students without the financial capability to experience the joy of the ocean).

Why is the LUMCON fund so important? Because it is the literal field course that transformed our own Dr. M from a rural Arkansas kid to a fancy executive director and badass marine scientist.

To reiterate: By supporting the LUMCON fund, you can directly help transform this scraggly youth (Dr. M when he had hair)

Our Executive Director, Dr. Craig McClain @DrCraigMc #FlashbackFriday #deepsn #LUMCONscience pic.twitter.com/eTJCzuFNoO

Into this high-powered marine scientist:

Dr. M is so giddy to have his marine science dream job!!

Any amount will help support a student – $10, $20, $100 or whatever you can spare – donate for a friend, donate because you love the ocean, donate because you wish you had this opportunity when you were younger!

So help get these students out on a boat, help them stick their hands in the mud! It just might transform them into a scientist! (…again, speaking from experience here. I love mud so much.)

Disclaimer: I have written this post solely under my own volition (without any influence from Dr. M, apart from our undying blog family love). He has had no input or editorial control over what I have written, and is very proper about keeping his official LUMCON duties separate from DSN. But I cannot be controlled! Mwahahaha.

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Repost: So You Want to Be A Deep-Sea Biologist https://deepseanews.com/2011/11/repost-so-you-want-to-be-a-deep-sea-biologist/ https://deepseanews.com/2011/11/repost-so-you-want-to-be-a-deep-sea-biologist/#comments Mon, 14 Nov 2011 16:30:50 +0000 https://www.deepseanews.com/?p=15816 When I wrote my So You Want to Be a Marine Biologist post yesterday, I had totally forgotten about Dr. M’s excellent take on more or…

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When I wrote my So You Want to Be a Marine Biologist post yesterday, I had totally forgotten about Dr. M’s excellent take on more or less the same issue. It’s especially embarrassing since apparently I both commented and linked to it from my old blog. Sorry, Craigie M. His post, entitled So You Want to Be A Deep-Sea Biologist? originally appeared on Deep Sea News on March 2, 2009.

In the past, a few readers, interns, random undergraduates, and a curious public have asked all three of us here at DSN “How do you become a deep-sea biologist?”  I write this from the perspective of obtaining a Ph.d. in marine biology and I am assuming the reader wants to go for a Ph.d. as well. Some of these are not specific to deep-sea research, but apply generally to any path toward graduate school in the sciences.  Below is my take on this, tips and tricks, lessons I’ve learned from doing things both the right and wrong way.

  1. Love and Pain…Like Sunshine and Rain. Welcome to Deep-Sea Science.  Before you start, you better realize what exactly you are heading into.  Deep-sea science can be both extremely rewarding and extremely heart breaking.  To be a deep-sea scientist is to be one part scientist, one part explorer, and three parts masochist. The logistical difficulties and financial requirements of sampling an environment covered with miles of water will pretty much make every project you want to do either impossible or close to it.  While other graduates students and scientists in your department drive a truck down to their field site and take samples till the cows come home, you will be having a nervous breakdown because of insufficient data.  A project that takes other scientists a weekend and $250 to do will take you three years and $250,000. So, deep-sea science is not for the faint of heart.  However, if you can manage to get a chance (which likely will not happen), then you will probably discover something new, a species, a habitat, a process, or a biological adaptation. Deep-sea science is a young field compared to many other science disciplines.  You will never be at a loss for questions, because most of the answers are still unknown.  Too bad you won’t be able address all of them.  I write this with tongue-in-cheek of course, but I am serious.  This is a tough field and doing deep-sea science isn’t easy.  Think about this for some time before you move to number 2.
  2. You Won’t Be Jacques Cousteau. Are you still here?  Well, now you better realize a few other things.  You are not going to be rich or famous.  You will not ride on Zodiacs chasing after charismatic megafauna.  You are not likely to spend every day riding around in a sub wearing a red stocking hat.  One week per year, one month if you are lucky, you will spend at sea.  How that time will fly by!  You will spend the rest of the year analyzing that material.  You will spend most of the remaining year writing.  Writing proposals, grants, papers, emails, etc. I hope you like to write. When you are not writing you will be doing menial and repetitive tasks.  Entering numbers into Excel, counting snails, programming, picking absurdly small organisms out of mud, mixing chemicals, these are the tasks that will fill your day.  You will also be spending a lot of time on a computer.  Not Facebooking, Ichatting, surfing the web for fun, playing the newest game.  O’ no my friend, your computer will be the vessel of menial tasks. Thankfully, those menial tasks may actually produce some sort of scientific product (but see Number One).
  3. Proving Yourself, Again, Again, and Again. From the time you make your first contact with a potential advisor to the time you are full professor, you will have to prove yourself again and again.  Publishing papers, obtaining grant money, getting positions, getting tenure, etc will all require an exhaustive and thorough review process of everything you’ve done.  If this doesn’t sound like fun then you should reconsider now.
  4. I Took Underwater Basket Weaving, What Other Classes Will I Need? Before you even think about graduate school you need to think about the classes you had as an undergrad.  Hopefully you have had multiple basic biology courses (ecology, physiology, evolution, genetics, microbiology) and paired that with some basic level physics, chemistry, and geology.  You don’t necessarily need an undergraduate degree in Marine Biology.  My own degree is in basic biology. Invertebrate Zoology will be a must and you better get an A in it (or ichthyology if you prefer the verts).  The deep sea and all of its weird creatures will challenge everything you learn.  Don’t start off behind.  I would require any potential graduate student to have a firm grasp of math and statistics (Calculus 1, Linear Algebra, and Basic Stats at least).  Modern science is increasing more quantitative.  Now we move to advanced modeling and analytical methods.  You can start learning them now or later.  Not required, although important, would be a basic logic course.  Good science is good logic.  Getting the basics can only help.  You should also make sure you can write well or at least sufficiently (see Number 2). Some basic understanding of mechanics and engineering would be plus as you deal with temperamental oceanographic equipment.
  5. Your Training Begins Now and You Are Already Behind. If you have made it to this point, then you are still behind.  You will need to start brushing up on everything deep sea.  Obviously, DSN is a good first step.  Pick a copy of Silent Deep, Deep-Sea Biology, or The Ecology of Hydrothermal Vents.  Better yet pick up all three and read them all.  When you start emailing people about graduate positions you don’t want to sound like an idiot.  Hopefully these books will give you some idea of exactly which subject you would like to research. Yes, you have to be more specific than “deep-sea biology”. If you find all this reading (that in the next step) burdensome or boring then consider another field.  You need to be passionate about the subject (see Numbers 1-3) so you should want to do this.  In fact, reading about the deep sea should be your idea of great way to spend an evening or weekend. You should feel like this is the greatest thing since sliced white bread.  If not, … well, this is not for you.
  6. Meet Google Scholar, Your Brand New Friend For the Next Several Months Now with all that basic level deep-sea knowledge comes the advanced stuff.  Use Google Scholar to search for primary literature on deep-sea topics.  You are looking to do a few things. 1) You want to know about all the new advances in deep-sea science (DSN can help you). 2) You want to know who are the movers and shakers in the field, both the legends and the new an upcoming movers and shakers. 3) You are looking for specific topics in deep-sea science that interest you.  Some deep-sea publications can be had online without subscriptions or library access.  There will be several you cannot get.  Don’t fret! Search for the first author’s website to see if they have posted the pdf on their lab’s website.  If not, don’t hesitate to email the first author or corresponding author (sometimes different) for a pdf.
  7. You Can Study Anything You Want, You Just Better Know What It Is. As you begin looking for potential Ph.D. advisors, you will definitely be asked what specifically you want to research.  You better have an answer.  You will probably want to pick a focal organisms or entire group (mine’s gastropods, KZ’s is anemones and vent critters, Peter’s is coral).  The most successful programs come from people having a focal taxon that provides the framework to address larger questions.  However, this not the complete story.  You need to have a specific question or topic.  Don’t worry there is no wrong answer here.  Scientists in the field just want to see you have put more thought in this than “deep-sea squid are totally sweet, and I need to work with them.”  A good example would be “The factors determining the geographic distributions of species X” or “the evolution of Y’s adaptations to the deep”. After you state the topic you are interested in, be prepared to answer why. Numbers 4 and 5 will help you narrow your ideas and present new ones.  Most papers and the books above will leave off with questions that are outstanding in the field.
  8. Ivy League, Great Surfing, Party School? It Doesn’t Matter! One of the biggest mistakes people usually make when applying for grad school is choosing the institution instead of the person they want to work with.  Sure the Ivy League is nice and the name recognition will help a little or living near the beach would be totally sweet, but ultimately they are not that important.  Your success will be measured by your own research and the products from that (i.e. publications).  Instrumental to this is picking a laboratory and an advisor who will provide both the research topic and the support you need.  Start by using your background readings to identify people whose research you find interesting and match your own interests.  Pick someone who is currently active in the field and publishing. They will be more likely to have the financial and field support you need.  Whatever you do, do not accept a position if you have not met the advisor or, more importantly, their graduate students.  Remember you will be spending a lot of time with this person over the next 5-8 years.  This is all about “fit” and if you “don’t fit” then things could go horribly wrong.  Current graduates students will always be honest about what its like working with Dr. X, and what their department is like.  In my own career, I choose not to work with one scientist because their graduate students were generally negative about their time in the lab.  Once you pick the advisor, the school will be picked for you.
  9. Email, Email, and Email some more. Once you find the person (and hopefully, people) you would like to work with (you want options) then you email them.  You want to make contact with this person.  Express your interest in their research.  Ask them questions about their research.  Ask for pdf’s of their work.  Ask them if they have graduate opportunities in their laboratory.  Ask them if you can come and visit. You are interviewing this person as much as they are you, so do not waste the opportunity to gain more information.  Don’t worry if they don’t immediately respond, they will be busy or even away at sea.  Send a reminder (two max).  If they don’t respond to you, or if you get a negative response, this is not bad.  In either of these cases you probably don’t want to be that person’s graduate student anyway.
  10. The GRE, Why It Hates You, and All The Other Stuff You Need To Get Into Graduate School. The GRE is a SOB but a necessarily evil.  Take it and score high, no problem.  Score low, things are not over but more become difficult.  In my experience, the GRE measures less what you know but rather how well you can take a test.  Although expensive, it would be well worth the money to take a GRE course.  Now in actuality the GRE is just single metric in which your application is viewed.  A high GPA, research experience, and a well-articulated essay go much further and can outweigh any GRE score (as long as you are above a minimum standard, but even that can be flexible).  If you are still an undergraduate (or even not) get some (any) research experience.  It shows dedication to and a familiarity with working in a laboratory or doing research.  Those experiences can also lead to strong letters of recommendation, which you will also need.  You don’t want your only letters coming from a course instructor with whom you took one class.  Now, here is the part that no one ever mentions.  Having a strong faculty advocate for your admission is essential.  This is why Number 9 is so important.  Typically, all the graduate applicants files are passed around the department and faculty are asked to make their picks.  If a faculty member wants you they will serve as an informal advocate in your behalf.  “I know so-so’s GRE’s are low, but I have had great interactions with this person, they visited the lab, they have X,Y,Z, and ultimately I think they will be a great fit.”
  11. You Better Make Sure You Really Love This.  See Number 1

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So You Want to Be A Marine Biologist: Deep Sea News Edition https://deepseanews.com/2011/11/so-you-want-to-be-a-marine-biologist-deep-sea-news-edition/ https://deepseanews.com/2011/11/so-you-want-to-be-a-marine-biologist-deep-sea-news-edition/#comments Mon, 14 Nov 2011 00:22:44 +0000 https://www.deepseanews.com/?p=15807 ARRRRR ME HEARTIES!!!! So ye want t’ be a pirate, t’ sail the open sea searching for booty – what? You said a marine biologist?…

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If this comic makes you laugh, perhaps you should become a marine biologist. Note the lack of dolphins.

ARRRRR ME HEARTIES!!!! So ye want t’ be a pirate, t’ sail the open sea searching for booty – what? You said a marine biologist? Oh. Well, sailing the open sea searching for booty is actually prohibited by UNOLS regulations – what? Oh, you wanted advice on how to BECOME a marine biologist. All right then. Fall must be the time when a
student’s heart turns toward the call of the sea, for I have received several requests for advice from undergraduate students.

And let me just get this out of the way – being a marine biologist is not about pulling golf balls out of whale blowholes or hugging dolphins. If you want to do that, become a wildlife veterinarian or a dolphin trainer. Marine biology is about figuring out the way the ocean works – and most of the ocean is not made out of dolphins. (That is too horrible a scenario to contemplate).

No, marine biologists cannot hug the dolphins. Original photo by Stefan Thiesen, Wikipedia.

There are bad reasons and good reasons to become a marine biologist. Fortunately Dr. Milton Love has a convenient list which you should go read immediately. Go there now. Still want to be a marine biologist? Did you read the part about the smell? Ok, you’re sure? Keep on reading this blog post, then.

The following advice is aimed at undergraduates, and is my personal opinion and should by no means be taken as the One True Way. I invite our marine biological readers (both academic and non-academic) to add their own suggestions in the comments.

GET YOUR ACADEMIC SCIENCE ON

You have to have a solid, traditional science background to be a marine biologist. This means the standard coursework in biology, chemistry, physics, math, and statistics. If you want to take environmental studies-interdisciplinary-type courses, go ahead, but it won’t do you any good without the basics. The easiest way to do this is to major in a hard science, but it is possible to major in something else so long as you do this coursework. You don’t have to love all of it – please don’t ask me about my grade in Organic Chemistry – but you have to do most of it reasonably well. I strongly recommend computer programming as well – scientists today live in a glorious sea of data, and you are going to have to know how to program in order to avoid drowning in it. (I spent a year and a half weeping into my R code – don’t be like me!).

Assuming you want to be a marine BIOLOGIST, take lots of biology! Ecology, evolutionary biology, genetics, microbiology, cell biology, invertebrate zoology…even if the course is not directly about marine science, you will be learning skills that can answer questions about the ocean. If you don’t like advanced biology courses, well, you probably won’t like marine biology.

FIND A WAY TO GET RESEARCH EXPERIENCE

So, marine biology is about learning how the amazing animals and ecosystems of the ocean work, but how exactly do we do that? RESEARCH! Classwork will give you the basics, but working in a lab or doing independent research is how you’re going to learn how science is actually done. It is easiest to start as an undergraduate, since there are lots of opportunities and resources out there to help you. (More on non-undergraduate opportunities later).

You might notice that many of the things on this list involve talking to your professors. Getting to know them is one of the best investments you can make, though I know it’s not easy, especially at large universities. But science professors (along with teaching) are also running a lab, doing research, talking with other scientists who are doing research, and have graduate students in need of help with their own research – so getting to know them is one of the best ways of getting your foot in the door. Also, you’re going to need recommendation letters for most of the below list of programs, and it’s pretty hard for a professor to write a letter for a student they’ve never spoken to. So go to office hours and talk to them – the best time is at the beginning of the semester when things are pretty quiet.

Here’s a list to get you started:

Working intensely with a lab has some pretty amazing advantages too. Here I am as a senior in college, in the field with my lab - whoever guesses my location gets a virtual cookie!
  • Work in a lab. I got started in marine ecology when some weird guy I knew from student theater said that his lab was hiring undergrad assistants. I needed a job, and that sounded fun. Well, scanning several thousand slides (this was before digital cameras) was not exactly fun per se…but it got me involved in the life of the lab. I met the graduate students, went to lab meeting, and started to learn how this whole science thing worked. Many labs hire undergraduate research assistants, and it is a great way to learn about science while gaining some useful skills. So go to your professors’ office hours and ask if there are any opportunities in their labs, or if they know of any in their departments.
  • Take a research semester abroad. There are many programs that allow you to go abroad, get course credit, and do science.  They may cost more money than your usual tuition, but may also have financial aid programs. The two programs I know of off the top of my head are Sea Education Association (sail on a tall ship, learn oceanography and maritime skills) and Three Seas Program (coastal marine science in New England, the Caribbean, and southern California). Both of these program have a strong academic component (e.g., you’ll do coursework in marine science) and emphasize independent research skills. No doubt there are more of these programs – if you have experience with one, please add it in the comments. [Update: Another program mentioned in the comments: the Williams College/Mystic Seaport Maritime Studies Program.] [Update II: Also CSU Marine Biology Semester at USC Wrigley Institute for Environmental Studies].
  • Do independent research. The core of being a marine biologist is, of course, research. One of the best ways to get research experience is through the National Science Foundation Research Experience for Undergraduates (REU) program. These are usually summer programs (though some are at different times of year) that set you up with a lab and and a mentor, and pay you a reasonable stipend (enough to satisfy most work-study requirements) to do research. You can search on their website for programs you might be interested in – here is the list of Ocean Sciences REUs. (I did two REUs as an undergraduate and they were both amazing experiences.) Another great resource is Pathways to Science, which focuses particularly on connecting underrepresented groups with mentors and opportunities. Your university may also have programs just for its own students – investigate by asking your professors and with the appropriate Student Affairs office. [Update: the MBARI Summer Internship.]

YOU’VE GRADUATED – NOW WHAT?

Once you are no longer a student, the path becomes more twisty and difficult, and some of the unfairness of the academic system kicks in. Here are your options:

  • Go directly to graduate school, do not pass go, and definitely do not collect $200. If you’ve majored in a hard science and gotten some independent research experience, you have the option of going directly to graduate school. (How to do that is a topic for another post.) While many excellent scientists have gone straight through, my personal recommendation is to take a year or three and getting some work experience. Enjoy not having homework and going out with your friends during the week. Being a bit older and more mature will help your sanity later on.
  • Get a job in academic science. Many labs have research assistants – people who are paid to help in the field or in the lab. These jobs can be an amazing way to get experience, to meet people in your field, and to go awesome places. Unfortunately, they are usually funded off grants, which makes them ephemeral and badly paid. Some only pay room and board, particularly those in exotic locations. If you don’t have student loans and can stay on your parents’ health insurance (and you are a traditional student in your early 20s) – these can be a great option for grand science adventures. If you have student loans and/or are not on your parents’ health insurance and/or cannot just pick up and go to crazy locations, these may be very difficult for you to do. The best resource for finding these type of jobs that I know of is the ECOLOG-L listserv. Other paid options that people I know have done include working as fisheries observers or as educators at aquariums.
Me with my rebar. You never know what experiences will prove invaluable.
  • Get a job that is not in academic science, but will give you useful experience anyway. When I graduated from college, I had to take a job that would not only pay me, but give me health insurance. While I found it frustrating at the time, it actually led to unexpected paths that have proved very valuable – for example, the construction job that taught me about managing a large project (and about rebar! I love rebar!). When I was interviewing for graduate school, my construction job made me stand out from the crowd. Just be prepared to explain how your nonstandard experiences will help you be successful in marine biology. However, this works best if you also have a strong science background from undergrad.
  • Get a nonscience job and volunteer with scientists. Many labs and research expeditions take volunteers along. If you have a regular job but want to get into science, volunteering can be a great way to get your foot in the door. This works best if you have some time available during regular work hours, but some people take volunteers at night or on the weekends. If you have a really flexible schedule, it is possible to volunteer to work on an oceanographic vessel for the duration of a cruise (which can be anywhere from a few days to several weeks). The best way to find volunteer positions is to email people who you might be interested in working with – even if they are not accepting volunteers, they may know someone who is.

IN SUMMARY

To paraphrase Michael Pollan: “Basic science. Lots and lots. Mostly research.”

MORE RESOURCES

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Teaching undergrads the ‘Bioinformatics of Biodiversity’ https://deepseanews.com/2011/04/teaching-undergrads-the-bioinformatics-of-biodiversity/ Sun, 03 Apr 2011 19:54:24 +0000 https://www.deepseanews.com/?p=13387 I’ve just wrapped up another whirlwind week in the Gulf of Mexico – a 3-day sampling trip spanning 250 miles of coastline, followed by a…

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I’ve just wrapped up another whirlwind week in the Gulf of Mexico – a 3-day sampling trip spanning 250 miles of coastline, followed by a weekend workshop for undergrads covering the “Bioinformatics of Biodiversity”

As far as sampling, I got what I needed but it wasn’t pleasant.  I re-sampled all our existing sites from Dauphin Island, AL to Bald Island State Park south of Tallahasse. Afternoon on the first day was enjoyable, but the sun surprised me and I got the burn to prove it.  The second day was gloomy and the third day was an absolute downpour with thunderstorms and tornado watches.  Science doesn’t stop for the weather, so I had to plod on.

A year later, there are STILL cleaning crews out on the beaches – Gulf Shores National Seashore (a beautiful preserve of ivory sand) got hit pretty hard last summer, and every storm still washes more oil ashore.  A ranger at Gulf Shores State Park in Alabama noted, “I moved here from Galveston to get away from oil on beaches, and then this happened”.

Our undergraduate workshop was a great success – we had 11 bright students who were eager to learn and always had insightful questions.   We enthralled the group with microscope taxonomy and next-generation sequencing technology in the context of our Gulf of Mexico RAPID project – all the methods we explained and demonstrated were tools we use every day in the lab, and it opened their eyes to the reality of scientific research.

But the most important component of this workshop was socializing, perhaps even more so than the science itself.  The divide between undergrads and professors—a subtle, easily ignored physical divide on campus—never really struck me until this weekend.  Many undergrads see their professors as old, boring and stuffy; they know nothing about their love of good beer and heroic liver capacities (a.k.a. god-like capacities for marine scientists).   We took the legally-aged undergrads to a bar and proved how cool we actually arerelaxing together with a beer really opened the communication channels and fostered a great dialogue.  And boy, did they have so many questions – about our research, applying to grad school, and possible career options.  As an undergrad, I would have KILLED to have dinner with a distinguished researcher and ask them how to tailor my grad school applications.  Most of what I know about how science works has come from real-world, informal conversations with other researchers—the earlier that undergrads realize this, the sooner the benefit for their personal and career development.  Talking to undergrads was also pretty uplifting for me as a postdoc—their enthusiasm was catchy, and it made me mentally resolve to reach out more towards this demographic in the future.

Group picture time!

By the end of the workshop the undergrads were threatening us with punitive vodka shots if we kept talking about maximum likelihood and gamma distributions on a sunny Saturday afternoon (hey, at least we fed them pizza first)…

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